Ideogram View
Search
Region Search
Enter a location, gene name or phenotype
Search Results:
Search term:
Name | Type | Chr | Location |
---|
Search examples:
- PTEN
- diabetes
- rs9677798
- ss666
- nsv532230
- 5p15
- chr1:1,500,000-2,000,000
- chr2: 1.5M - 2M
- chr2: 1.5M-2,540.2K
- 2:1,500,000-2,000,000
- 3: 21.33M - 22.01M
- 3: 21.335M..21.337M
- chr1:1,500,000 / 200
- chr1:101,500,200
- 1:101,500,200
- 1:1,500K/0.5K
- chr5
- 10
Add Tracks
Enter an accession for a track on this assembly
Supported accession types
- GEO accessions:
- GSE25249 (for GRCh37)
- GSM1541970 (for GRCm38)
- SRR accessions:
- SRR834589 (for GRCh37)
- dbGaP accessions:
- pha000001 (for GRCh38)
- dbVar accessions:
- nstd82 (for GRCh38)
User Data and Track Hubs
Name | Location | |
---|---|---|
Supported File/Data types
- BED
- GFF3
- GTF
- GVF
- VCF
- HGVS
- WIG
- Remote BAM
- ASN.1 (text and binary)
Assembly Region Details
History
Select gene from history
Downloads
Download SRA data from the 1000 Genomes Browser using SRA toolkit
- Install and Configure the SRA toolkit.
- Show command line parameters
- Show SRA Runs for selected tracks
- SRA Run Selector
Download genotype data
Selected chromosome:
Selected range:
Format:
Format:
Warning: results can be truncated to the first 1,000,000 positions
Drag region slider's side bar to resize. Drag center bar or Alt-drag to move. Drag zoom slider to zoom in or out.
Drag ruler or use the arrow buttons to scroll the visible range.Click or Shift-click the ruler to select a column. Alt-click or Shift-Alt-click to show on sequence.
Study:
Go to Selection
Scroll Region
Populations / Samples
Check to add the track. Uncheck to remove the track.
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