|
NCBI Web Resources:
BLAST.
Compare your sequence to different
mouse-derived sequences.
Clone
Finder. Find clones based on
BAC end sequence alignments.
Clone
Registry. Find information
about specific BAC clones, including sequencing status, end sequence
and Fingerprint information.
dbSNP.
Database of SNPs and other genetic variation.
e-PCR.
Check your sequence
for STSs and view in genomic context.
Full-Length
cDNAs. Find info on various
efforts to sequence entire genes.
GEO.
Gene Expression Omnibus, a public repository for
expression data.
HomoloGene.
Putative homologies among human, mouse, rat, and
zebrafish.
Homology
Map. Blocks of conserved synteny between mouse and
human.
LocusLink.
Focal point for genes and associated information.
MapViewer.
Interactive viewer for genome maps, sequences, and
genes.
RefSeq.
Reference sequences of genomic contigs, mRNAs, and
proteins.
SAGEmap.
Gene expression results from SAGE tags mapped to
sequences.
Sequencing.
Summary of mouse genome sequencing progress.
Trace
Archive. Collection of raw sequence traces from
various sequencing projects.
UniGene.
Organization of transcribed sequences into gene-based
clusters.
UniSTS.
A non- redundant collection of STSs with links to
maps and sequence.
FTP Sites:
dbSNP
LocusLink
Genomes
RefSeq
UniGene
|
Genomic resources
for the mouse are increasing at an astounding pace. The ability to
manipulate the mouse genome coupled with the availability of genome
sequence make the mouse a unique research tool.
This page is a gateway to mouse resources in and beyond NCBI.
Just In...
- NCBI Build 33 released! Third composite mouse assembly
combining MGCSv3 and BAC sequence. For more information on the build
process, click here.
- View alternative assemblies: Finished sequence from strains
other than C57BL/6J is also assembled and annotated. Select the
'assembly' map to see alternate assemblies. Click here
for an example.
-Need full-length cDNA sequence? click here
to find out more.
-
CloneFinder: find clones containing an object of interest or
in a region of interest.
- QTL data from MGI now in the MapViewer
**see
chr2 as an example!**
BLAST
curated BAC contigs, and mouse WGS shotgun assemblies.
Mouse Genome Monthly: a newsletter from the mouse genome
sequencers to the mouse research community.
November 2001
December
2001
January
2002
April
2002
Other Genomes:
Human
Genome Guide
Rat Genome
Guide
Zebrafish
Genome Guide
|
Genomic Biology
