Can I change how agreement or disagreement at positions in the alignment are displayed in the consensus sequence or in the alignment generated by Pretty?

• -IDEntity displays only those residues in the consensus sequence that are unanimous at a given position in the alignment. If you specify a symbol, such as -IDEntity=*, the program displays that symbol in the consensus sequence. If you do not specify a symbol, the unanimous residue will appear in the consensus sequence at that position.
• -DIFferences displays only those residues in the alignment that disagree with the consensus sequence at a given position in the alignment. If you specify a symbol, such as -DIFferences="-", that symbol will be displayed in the alignment at those positions that agree with the consensus. If you do not specify a symbol, the position will be blank.
• -CASe displays residues in the alignment that agree with the consensus sequence in uppercase and those that disagree with the consensus in lowercase.