Sample session:

helix% lookup LookUp identifies sequences by name, accession number, author, organism, keyword, title, reference, feature, definition, length, or date. The output is a list of sequences. The LookUp program is experimental in this release--please look carefully at your results. LOOKUP in what sequence libraries: a) swissprot b) pir c) embl d) genbank e) em_tags f) gb_tags g) gb_new h) genpept i) All libraries q) quit Please choose one or more (* i *): d Complete the query form below: All text: tryptophan synthase Definition: Author: Keyword: Sequence name: Accession number: Organism: Reference: Title: Feature: cds On or after (dd-mmm-yy): On or before (dd-mmm-yy): Shortest sequence length: Longest sequence length: Inter-field operator: AND Form of output list: Fragments Press D to continue. Searching genbank 32 features were found. Do you wish to: 1) write out this list to a file 2) preview the results 3) refine the query 4) choose different libraries q) quit Please choose one (* 1 *): 1 What should I call the output file (* lookup.list *) ? test.list .... 32 features were written to "test.list" helix% translate @test.list Translate translates nucleotide sequences into peptide sequences. acctrpf from 506 to 1147 acctrpf from 1149 to 1466 bactrpab from 179 to 1393 bactrpab from 1374 to 2183 bactrsyb from 31 to 1233 brltrp2 from 1 to 366 buhtrpb from 1 to 676 buhtrpba from 1 to 676 buhtrpbb from 1 to 679 buhtrpbc from 1 to 676 ccrtrpfba from 181 to 450 ccrtrpfba from 500 to 1159 ccrtrpfba from 1182 to 2402 ccrtrpfba from 2415 to 3242 mvotrpba from 1 to 206 mvotrpba from 304 to 1533 mvotrpba from 1571 to 2425 mvotrpba from 2460 to 2600 (reverse of) mvotrpba from 2666 to 2874 (reverse of) pptrpab from 1 to 18 pptrpab from 129 to 1346 pptrpab from 1343 to 2152 (reverse of) psetrpbai from 99 to 908 (reverse of) psetrpbai from 908 to 2134 psetrpbai from 2245 to 3141 syctrpb from 518 to 1756 ab003491 from 1 to 1413 athtrpb from 1517 to 1858 athtrpb from 2109 to 2465 athtrpb from 2549 to 2991 athtrpb from 3084 to 3178 athtrpb from 3275 to 3450 athtrpsb from 442 to 798 athtrpsb from 1174 to 1530 athtrpsb from 1606 to 2048 athtrpsb from 2136 to 2230 athtrpsb from 2322 to 2497 cynpltrnk from 148 to 876 mzeorp1a from 1 to 1170 mzeorp2a from 3 to 1334 Output files called "*.pep"