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RefSeq
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Plant Genomes Central - Genome Projects in Progress |
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The plant genomic effort has one technical hurdle relative to other genomic efforts. The range of plant genome size is very large extending from approximately the same size as the genome of many small animals to more than five times as large as the human genome.
For each organism, the number of chromosomes is indicated by the integer within brackets preceding the
Linnaean binomial name of the organism. For the Large-Scale Sequencing Projects and the Genetic Maps groups,
the organism name links to the Map View overview page for that organism. For the Large-Scale EST Sequencing Projects group,
the organism name links to the taxonomy page at NCBI. The Map View of a particular chromosome or organelle is accessed by
following the link for that chromosome or organelle.
The available maps of Oryza sativa
now include
a graphical display of the recent status of the International Rice Genome Sequencing Project.
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Plant-oriented Resources at NCBI |
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- Multi-species plant genome map search
- Customized plant genome BLAST
This BLAST database includes three datasets:
- GenBank sequences used to identify mapped genetic loci in Avena sativa (oat),
Hordeum vulgare (barley),Oryza sativa (rice), and Triticum aestivum (wheat)
- The collection of contigs developed by the Chinese WGS endeavor
- The Arabidopsis thaliana genome
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Large-Scale Sequencing Projects |
[5] Arabidopsis thaliana (thale cress)
[12] Lycopersicon esculentum (tomato)
chromosomes:
1,
2,
3,
4,
5,
6,
7,
8,
9,
10,
11,
12,
plastid, mitochondrion
[8]
Medicago truncatula (barrel medic)
chromosomes: 1, 2, 3, 4, 5, 6, 7, 8
plastid, mitochondrion
[12] Oryza sativa (rice)
chromosomes:
1,
2,
3,
4,
5,
6,
7,
8,
9,
10,
11,
12,
plastid
, mitochondrion, mitochondrial plasmid B1,
mitochondrial plasmid B2,
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[7] Avena sativa (oat)
chromosomes:
A,
B,
C,
D,
E,
F,
G,
plastid, mitochondrion
[20] Glycine max (soybean)
chromosomes:
A1,
A2,
B1,
B2,
C1,
C2,
D1a,
D1b,
D2,
E,
F,
G,
H,
I,
J,
K,
L,
M,
N,
O, plastid, mitochondrion
[7] Hordeum vulgare (barley)
[12] Lycopersicon esculentum (tomato)
chromosomes:
1,
2,
3,
4,
5,
6,
7,
8,
9,
10,
11,
12,
plastid, mitochondrion
[12] Oryza sativa (rice)
chromosomes:
1,
2,
3,
4,
5,
6,
7,
8,
9,
10,
11,
12,
plastid
, mitochondrion, mitochondrial plasmid B1,
mitochondrial plasmid B2,
[10] Sorghum
chromosomes:
1,
2,
3,
4,
5,
6,
7,
8,
9,
10,
plastid, mitochondrion
[7] Triticum aestivum (bread wheat)
chromosomes:
1A,
1B,
1D,
2A,
2B,
2D,
3A,
3B,
3D,
4A,
4B,
4D,
5A,
5B,
5D,
6A,
6B,
6D,
7A,
7B,
7D,
plastid, mitochondrion
[10] Zea mays (corn)
chromosomes:
1,
2,
3,
4,
5,
6,
7,
8,
9,
10,
plastid, mitochondrion,
mitochondrial 1.9 kb plasmid
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Large-Scale EST Sequencing Projects |
Revised September 24, 2004.
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