A Head Start on Mapping Two Cereal Crop
Genomes By Luis
Pons October 8, 2004
Detailed genome maps of the cereal crops maize and sorghum are
thought to be at least three years away. But Agricultural Research Service computational
biologist Doreen Ware believes scientists shouldn't have to wait that long for
these maps.
Ware, based at the ARS
U.S. Plant, Soil and
Nutrition Laboratory in Ithaca, N.Y., and colleagues are trying to give
researchers a head start on these studies by supplementing what's currently
known about the genetic makeup of sorghum and maize with data from the genome
map of rice.
Rice, the first crop to be almost fully genetically sequenced,
is a relative of the two cereal crops. However, the genomes of maize and
sorghum will take longer to complete because they are large and complex,
compared to the rice genome.
Ware is enhancing data already in the public domain to highlight
points of similarity between the genomes of each crop. She's working with
collaborators at the Cold Spring Harbor
Laboratory on New York's Long Island, Texas
A&M and Purdue universities, and
the University of Missouri.
According to Ware, the study will add to knowledge of genome
organization and the evolutionary relationship between three agronomically
important crops. Researchers will also develop methods for building and
finishing comparative maps that can be applied to future genome-scale
projects.
Ultimately, the project may help scientists and growers identify
genes responsible for traits that will lead to stronger, more nutritious crops.
She has received a $1.3-million "Young Investigators" award from the
National Science Foundation for this study.
The foundation is an independent federal agency supporting fundamental research
and education across all fields of science and engineering.
Ware is working at the Cold Spring Harbor Laboratory, a private,
nonprofit institution, because it allows her access to cutting-edge genomics
expertise and equipment.
Read more
about the research in the October 2004 issue of Agricultural Research
magazine.
ARS is the U.S. Department of
Agriculture's chief scientific research agency. |