NCBI Web Resources
The NCBI Handbook.
An online guide to NCBI resources.
BLAST Traces. Search Trace Archive with MegaBLAST.
BLAST Zebrafish. BLAST your sequences against Zebrafish mRNA, EST, and genome sequences.
Clone Registry. Find information about specific clones selected for genome sequencing.
dbSNP. Database of SNPs and other genetic variation.
Entrez Gene. Focal point for genes and associated information.
e-PCR. Review in genomic context your sequence for sequence tagged sites (STSs).
FLcDNA Projects. View Full-Length cDNA Project summaries and links to resources.
GeneRIF. Gene References into Function.
HomoloGene. View calculated and curated homologs for plant and animal genes.
Map Viewer. View and navigate among NCBI's suite of genome-specific Map Viewer and BLAST pages.
RefSeq. Reference sequences of mRNAs and proteins.
Trace Archive. Collection of raw sequence traces from various sequencing projects.
UniGene. Organization of transcribed sequences into gene-based clusters.
UniSTS. A non- redundant collection of STSs with links to maps, primers, and sequences.
FTP sites:
dbSNP
LocusLink
RefSeq
UniGene
Zebrafish Maps
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Welcome to the Zebrafish Genome resources page.
This homepage will bring together information on NCBI and community
zebrafish-related resources including sequence, mapping, and clone
information.
This month in...
PubMed
GenBank
Upcoming Meeting:
4th European Fish Genetics and Development Meeting
Dresden, Germany
July 13-16, 2005
What's New
August 2004
Genome Resources Workshop
Slides and Tutorial
view or download
workshop slides or tutorial
navigate to NCBI, ZFIN or Sanger
resources by provided links
NCBI, ZFIN and the Sanger Institute presented a joint workshop
on genome resources at the 2004 Zebrafish Development and Genetics Meeting.
April 2004
MGH Primer Selection Tool
Identify simple sequence repeat (SSR) markers/primer pairs in Sanger's finished BACs or the Zv3 Assembly supercontigs.
February 2004
ZF-MODELS Project
launched to study zebrafish models for
human development and disease.
January 2003
Zebrafish Full-Length cDNAs
Zebrafish Gene Collection (ZGC) has deposited
over 3000 clones in GenBank.
Set of all ZGCs in GenBank
January 2003
Danio rerio added to EBI's Genome Monitoring Table.
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