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Rattus norvegicus:  UniGene Build #137

 
Lineage:  cellular organisms; Eukaryota; Fungi/Metazoa group; Metazoa; Eumetazoa; Bilateria; Coelomata; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Rodentia; Sciurognathi; Muridae; Murinae; Rattus; Rattus norvegicus

Sequences Included in UniGene
Known genes are from GenBank 01 Nov 2004
ESTs are from dbEST through 01 Nov 2004

  18,098 mRNAs
  12,018 Models
  450 HTC
  255,798 EST, 3'reads
  275,333 EST, 5'reads
  13,156 EST, other/unknown
  574,853 total sequences in clusters

Build Method: Genomic

Alignments between transcript sequences and genomic sequences are used to generate clusters of sequences originating from the same gene.
More...


Final Number of Clusters (sets)
  40,406 sets total
  7,312 sets contain at least one mRNA
  422 sets contain at least one HTC sequence
  39,807 sets contain at least one EST
  6,810 sets contain both mRNAs and ESTs

Histogram of cluster sizes for UniGene Rn build 137

Cluster Size  Number Of Clusters
2,049-4,096 2  
1,025-2,048 3  
513-1,024 8  
257-512 53  
129-256 251  
65-128 1210  
33-64 3439  
17-32 4426  
9-16 4726  
5-8 5264  
3-4 7172  
2 10167  
1 3685  




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