helix 75% findpatterns -data=genmoredata:tfsites.dat
FindPatterns identifies sequences that contain short patterns like
GAATTC or YRYRYRYR. You can define the patterns ambiguously and allow
mismatches. You can provide the patterns in a file or simply type them
in from the terminal
FINDPATTERNS in what sequence(s) ? aw778747.gb_est46
What should I call the output file (* aw778747.find *) ?
aw778747.gb_est46 len: 410 ....................................
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FINDPATTERNS in what sequence(s) ?
Total finds: 45
Total length: 410
Total sequences: 1
CPU time: 01.63
Output file: aw778747.find
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