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 FY05 NCID Research Concepts

NCID BIOTERRORISM EXTRAMURAL RESEARCH GRANT PROGRAM
PROGRESS REPORT

The NCID Office of Extramural Research funded $8.4 Million in 9 Biodefense Research Grants in FY03. This report provides progress in achieving research objectives in year one of these awards and is organized by NCID areas of interest for bioterrorism and infectious disease research:

  1. Surveillance and Epidemiology
  2. Interruption of Transmission
  3. Environmental Detection

SURVEILLANCE AND EPIDEMIOLOGY

Dr. Lawrence Glickman of Purdue University is developing a nation wide veterinary medical disease-surveillance operating system (VMD-SOS) to alert public health officials to naturally occurring or man-made environmental hazards before they would otherwise be recognized. The infrastructure for VMD-SOS is complete and includes data transferred from >10,000 animal patients per day in 400 hospitals located in 42 states and software programs for data management and analysis.

Dr. Glickman successfully validated the VMD-SOS system in a pilot study in the Washington, D.C., area for Canine Parvovirus infection.

Presentations:

“Use of the VMD-SOS for Surveillance of Veterinary Drug Associated Adverse Events”. 2004. Food and Drug Administration Center for Veterinary Medicine, Rockville, MD. Glickman L, Glickman N, and Lewis H.

“Companion Animal Surveillance”. 2004. American Veterinary Medical Association Annual Convention, Philadelphia, PA. Moore G, and Glickman L.

“Development of a National Companion Animal Syndromic Surveillance System for Bioterrorism”. 2004. GIS Veterinary Conference, Ontario, Canada. Moore G, Ward M, Dhariwal J, Wu C, Glickman N, Lewis H, and Glickman L.

“Use of a Veterinary Practice Medical Database for Surveillance of Companion Animal Syndromes and Diseases”. 2004. 22 nd Annual American College of Veterinary Internal Medicine Forum, Minneapolis, MN. Moore G, Ward M, Dhariwal J, Wu CC, Glickman N, Lewis H, and Glickman L.

“The VMD-SOS Animal Disease Surveillance System”. 2003. Multi—Hazards Symposium, North Carolina Dept. Agriculture and University of North Carolina, Research Triangle, NC. Glickman L, Moore G, and Glickman N.

Dr. Trish Perl of Johns Hopkins University is developing a national syndromic surveillance system based on automated data mining from a computerized patient record system. The objectives are to develop and validate such a system based on available clinical and laboratory data to accurately track disease syndromes most consistent with the characteristics of a bioterrorism event.

INTERRUPTION OF TRANSMISSION

Dr. Thomas Chambers of St. Louis University in Missouri is using molecular determinants of flavivirus virulence in humans to develop vaccines. His detailed molecular characterization of yellow fever virus and Japanese encephalitis virus has implications for genetic engineering of these viruses for vaccine production. He constructed a novel chimeric virus of Japanese encephalitis virus and dengue 2 virus that was shown to be highly protective against fatal dengue encephalitis in a challenge model using a mouse neuroadapted dengue 2 strain.

Publications:

Vlaycheva L, Droll DA, Nickells M, and Chambers T J. Neuroblastoma cell-adapted yellow fever 17D: Mutagenesis of a locus involved in persistent infection and effects on virus penetration and cell-to-cell spread. Submitted. J. General Virology.

Vlaycheva L, Nickells M, Droll DA, and Chambers TJ. 2004. Yellow fever 17D virus: Pseudoreversion of defective virus penetration and spread by mutations in domains II and III of the envelope protein. Virology, 327: 41-9.

Nickells M, and Chambers TJ. 2003. Neuroadapted yellow fever virus 17D: determinants in the envelope protein govern neuroinvasiveness for SCID mice. J. Viroloogy 77: 12232-42.

Dr. Gary Bokoch of Scripps Research Institute is investigating the molecular mechanisms by which Bacillus anthracis suppresses innate human host defense mechanisms. This laboratory identified a new mutant phenotype associated with resistance to lethal factor action on mouse macrophages and characterization of this mutant is underway. This laboratory also screened p22phox polymorphisms, an essential component of NADH/NADPH oxidase, for susceptibility to B. anthracis infections and concluded that there is no evidence for an association of identified polymorphisms with an increased susceptibility to infection.

Dr. Christopher Collins of SRI International is developing new antibiotic drug candidates for use against Category A bacterial pathogens. Dr. Collins tested over 189 compounds expanding the structure-activity relationship data and providing the basis for designing novel new compounds that show good antimicrobial activity against S. pneumoniae and B. anthracisS. aureus, E. faecalis , Y. pestis, and F. tularensis.

Patent entitled:

Nitofuran Antimicrobials 2004.
This patent lists the structures of the new antimicrobial agents.

Presentations:

Mortelmans K, Tanga M, Collins C, Hokama L, and Cisneros J. Novel nitrofuran-like antimicrobial agents against biodefense organisms. 2003. ICAAC, Chicago, Il.

Dr. Stephen Jameson of the University of Minnesota Medical School is studying the nature of anti-viral T-cell responses against the pox virus vaccinia to further understanding of vaccination efficacy in immunodeficient individuals. Preliminary experiments using vaccinia with L. monocytogenes as a control show that mice recovering from sub-lethal irradiation can still respond to vaccinia and Listeria infection by generation of functional CD8 effector T-cells.

Dr. Leslie Berg at the University of Massachusetts is studying tyrosine kinases and the tyrosine kinase signaling pathways in anti-viral T-cell mediated immunity. Dr. Berg has demonstrated that tyrosine kinase deficient mice infected with Lymphocytic choriomeningitis virus (a member of the hemorrhagic fever viruses) have a reduced T-cell effector response and that the T-cell defects are not due to a lack of CD4+ T-cell help.

ENVIRONMENTAL DETECTION/ENVIRONMENTAL MICROBIOLOGY

Dr. Ashutosh Chilkoti of Duke University is developing a nanotechnology platform for real time environmental detection of Category A pathogens. Dr. Chilkoti fabricated nano chips after successfully synthesizing and characterizing gold nano particles. The performance of the chips resulted in several publications.

Publications:

Nath N, and Chilkoti A. Submitted. Real-time, label-free biosensing using gold nanoparitcles on a surface: optimization of nanoparticle size. Anal Chem.

Nath N, Chilkoti A. InPress. Biosensors based on metal nanoparticles. “Topics in Fluorescence Spectroscopy” Vol 8. Ed: J.R. Lakowicz. Plenum Publishers, NY.

Nath N, and Chilkoti A. 2004. Label free colorimetric biosensing using nanoparticles. J. Fluorescence 14: 377-89.

Presentations:

Nath N, Chilkoti A. 2003. Real-time label free biosensing using immobilized gold nanoparticles: influence of nanoparticle size on sensor performance, 50 th AVS Intl. Symp., Baltimore, MD.

Nusz G, and Chilkoti A. 2003. Single nanoparticle detection of biological molecules via darkfield microscopy, 50 th AVS Intl. Symp., Baltimore, MD.

Marinakos SM, Nath N, and Chilkoti A. 2003. Label-free biosensor based on the surface plasmon resonance of gold nanoparticles, 50 th AVS Intl. Symp., Baltimore, MD.

Dr. David Ecker of Ibis Therapeutics is completing the development and validation of the infectious disease diagnostic platform that was created to detect a broad range of biological weapons agents in samples collected from the environment. The kit is ready for laboratory validation.

Patent entitled:

Method for Rapid Purification of Nucleic Acids for Subsequent Analysis by Mass Spectrometry by Solution Capture.

U.S. Patent Application Serial No. 10/844,938, filed on 5/12/04.

Patent Cooperation Treaty (PCT) Application Serial No. PCT/US2004/015196, filed on 5/13/04.

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